VPA_BP186/139-454ADIDLLAADIANFIRAELADIDD.........TGFSELKTLYTWYMRAGFI.SLQFNVTP CONSENSUS/80% .phpphutthst.h..hhtthtp.................hhphaphhuth.shp.th.. CONSENSUS/65% schpchutchup.hthhhpphsc...............t.hhphYphluph.shs.php. CONSENSUS/50% s-lc+LAs-lAstaptphpcls-....h....pt..h.ptltpsYctLApl.ulshslsh VPA_BP186/139-454..PKW.......ERVTKKYFCEDEIAPAVMRMFNEVWWRGRLRRIAAAWREHLQIAVGNV CONSENSUS/80% ..P............................hhs-pWahtphh......hc........V CONSENSUS/65% ..P.h...................h...h.Rhhs-pWahtphht.th.hhEt...hh..V CONSENSUS/50% ..Pta.......ch.tcpphptcpl.sslhRhss-cWWh+cL+phptthtEclhhAhspV VPA_BP186/139-454SKKRHAYASKNCVTDWREQKRRTREFLKGLDLEDEEG..NRISLIEKYDGSVANPAIRRC CONSENSUS/80% spptp.YsS.pslpch+tp....hphh+sh.l.s-ps....h.L.phh.tS......RRs CONSENSUS/65% spptssYsStpslp-h+tppptphcal+sh.lcsE-s....hpL.chhhtS.uNP.hRRs CONSENSUS/50% sKcpSPYASpculc-hRpp+ppsh-aLKuhsLcsE-u..ppl-Lp-hstKSlSNPslRRs VPA_BP186/139-454ELMARIRGFENICNELGYVGEFYTLT.APSKYHATTKAGYRNSK.......WNG.AS.PS CONSENSUS/80% chh.plhsh.phuptpG.hshF.TlT.sss+h+s..pt....................Pp CONSENSUS/65% Ehhs+ltuhEchAptpG.hulFhTlT.APS+aHs.hcs.............a.t.s..Pp CONSENSUS/50% EhMsRl+GhEclAcpcGhhuVFhTLT.APS+aHAshcsGt.psK.......Wss.As.P+ VPA_BP186/139-454..DTQSYLTGLW.ARIRAKLHREEIRIFGIRVAEPHHD..............GTPHWHML CONSENSUS/80% ..thpsYhhphh.thhRtt.........Gh+ls-sHpD..............Gp.HaHhl CONSENSUS/65% ..sspsYLhshh.thhRsthpc.tl.haGhRVsEPH+D..............GTsHWHhl CONSENSUS/50% ..-spcYLscla.uslRAcLp+tpl+haGlRVsEPHHD..............GTPHWHhL VPA_BP186/139-454MFMLP..............EDVERVRLIIRDY........AWEEDHYELRSDKAK..... CONSENSUS/80% hahhs..............cp.ptl.phhtph........Ahp.stpt...pt....... CONSENSUS/65% hahhs..............cphpplpphhppa........Alc.stsE...pshh..... CONSENSUS/50% hFM+s..............Ecccplsslh+sa........Alc-Dp-EhttcGtt..... VPA_BP186/139-454............KARFHAEAIDPEKGSATG.YVAKYISKNIDGY CONSENSUS/80% .............schpsc.lp.pphtAsu.YlAKYluKp.Dt. CONSENSUS/65% ............tsRhcuEhlcsppGsAsu.YlAKYluKNlDu. CONSENSUS/50% ............psRFKuEtlDsoKGoAsG.YIAKYISKNIDGp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |