FIMB_ECOLI/11-183NFLTHSEIESLLKAANT.....GPHAARNYCL......TLLCFIHGFRASEICRLRISD. CONSENSUS/80% ..l..pph.tlhth.t..........hh.thh......h.hhh.sGhRhu-hhtlphts. CONSENSUS/65% .hLptcplpplhptspt.........hps+sh......ltlhhtTGhRluElhsLchp-. CONSENSUS/50% chLsp--lccLlcsscs.....tshshRc+uh......lcLhasTGlRlSElssLclsD. FIMB_ECOLI/11-183IDLKAKCIYI.................HRLKKGFS......TTHPLL...NKEVQALKNW CONSENSUS/80% lpht.thhhl....................Ktthp......hhhshs....thh.hhp.h CONSENSUS/65% lshppthhhl...................tKsp+p......+hlPls...pthsphlcph CONSENSUS/50% lDhcssplpl.................tpuKssKc......RsVPLu...cssscsl+ch FIMB_ECOLI/11-183LSIR....TSYPHAESE......................WVFLSR...........KGNP CONSENSUS/80% ht.t...........tp......................hlh.pt............t.. CONSENSUS/65% lstt........t..p-......................hlFhsp...........tsp. CONSENSUS/50% lsps.....hhttsps-......................hlFlu+...........+upp FIMB_ECOLI/11-183LSRQQFYHIISTSGGN...AGLS......LEIHPHMLRHSCGFALANMGIDTRLIQDYLG CONSENSUS/80% h.tpsh.thhpphh.t....sht........hp.H.hR+shusthhptuhs.phlpthhG CONSENSUS/65% hsppshpphhcphsht...sulp.......thpsHtLRHohuopLhppGhslcslQchLG CONSENSUS/50% locpslp+tl++hspc...AGlc.......clsPHsLRHoaAT+LlcsGsDl+slQclLG FIMB_ECOLI/11-183HRNIRHT.VWYTASNAGR CONSENSUS/80% Htshp.s..hYhp..... CONSENSUS/65% HpslspT.phYs+ss... CONSENSUS/50% HssluoT.phYsHlstpc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |