Q9Y7C5/101-218 AVIIGNHQS---ELDVLMLGEIFPP----------------------------------- CONSENSUS/80% hlhhsNH.s....hD.hhh..hh..................................... CONSENSUS/65% hlllsNHpo...hlDhhhlhhhh..................................... CONSENSUS/50% sllluNHpS...hlDslllsthhhp................................... Q9Y7C5/101-218 ---------------------------------------------------------YCS CONSENSUS/80% ...........................................................h CONSENSUS/65% .........................................................thh CONSENSUS/50% .........................................................psp Q9Y7C5/101-218 VTAKKSLRYVP-----FLGWFMALSRTV----FIDRANR--------------------- CONSENSUS/80% hhhptthh........hht.hh..hthh.....lppt....................... CONSENSUS/65% hlucpphhhhs.....hhuhhhphhshl.....lpRptt..................... CONSENSUS/50% hlAKcpltphP.....hhGhhhctsusl....hlcRsps..................... Q9Y7C5/101-218 --------QTAVKAFDSAAE---------EMRSHRQS---------------------VF CONSENSUS/80% ............t.htthhp... .....httt.......................lh CONSENSUS/65% ...........hpshpphhp... ....hhppsth.....................lh CONSENSUS/50% ........ttstsslccslc... ....hlppuph.....................lh Q9Y7C5/101-218 IFAEG-----TRSYSEKP----------------------------ELLPFKKG--AFHL CONSENSUS/80% haPEG.....sh...t........ ...............hp.u..hh.h CONSENSUS/65% lFPEG.....Tpspst........ ...........thh.h+tG..shth CONSENSUS/50% lFPEG.....TRssss........ ...........phhphKpG..shpl Q9Y7C5/101-218 AVKAG--------------VPIVPVVVENY CONSENSUS/80% s.......... .......lhPhhh.h. CONSENSUS/65% uhpst...... .....s.llPlshtht CONSENSUS/50% Ahpst...... .....ssllPlslsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |