205921.SAK_2084_from_215_to_28TLFNGFGDEGGRNVALTKFVGLL-------FNKWVDCDIETAYELTKIANS---VTANPL CONSENSUS/80% ..hht..ttGtRNshlhphsshh.......htp...hp.t.h.thh..hst....spssh CONSENSUS/65% thhhsshspGsRNssLtphsuth.......hpp...ss.p.hhthhpthsp...hspsPL CONSENSUS/50% shhsushsEGsRNssLschAGcl.......hpct.hs-sppshsllpshNs...tssPPL 205921.SAK_2084_from_215_to_28PERELDRTFESIARAEFR CONSENSUS/80% sttEhpthhpShhph..p CONSENSUS/65% sppElpphhcShh+h..p CONSENSUS/50% sccElcsshcSlh+pptc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |