HSU237H1_1-177 LKFLLVGDRDVGKSEILESLQDGTAESPYS-HLGGIDYKTTTILL----------DGQRV CONSENSUS/80% hKllllG-suVGKoslh.paspspF..p...sTlGl-Ft.+.lph..........psphl CONSENSUS/65% aKlllIGDSGVGKosLltRFscspFstp.t.sTIGV-Fts+plpl..........cu+pl CONSENSUS/50% FKlllIGDSGVGKSsLLsRFscscFssppp.uTIGVDFpsKslpl..........-GKcV HSU237H1_1-177 KLKLWDTSGQGRFC-TIFRSYSRGAQGVILVYDIANRWSFEGMDR-WIKKIEEHAPG--- CONSENSUS/80% +hQlWDTAGQERap.slstuYYRsA.uhlllYDlopttoFppltp.Whp-hp.hss.... CONSENSUS/65% KlQIWDTAGQERFR.olTsuYYRGAhGsllVYDlTpcpoFpslpp.Wlc-lcpauss... CONSENSUS/50% KLQIWDTAGQERFR.olTsuYYRGAsGslLVYDITc+sSF-slpp.WlcElcpauss... HSU237H1_1-177 --VPKILVGNRLHLAF----KRQVPREQAQAY-------------AERLGVTFF-EVSPL CONSENSUS/80% .sh.hhLlGNK.Dhtp ...+tVs.pputth.............upp.th.ah.EsSAh CONSENSUS/65% .shshhLlGNKsDlpp ..pRtVsp--upth.............Acctsh.ah.ETSAp CONSENSUS/50% .sllllLVGNKsDLcc ..pRsVopEEAppa.............AccpulhFh.ETSAK HSU237H1_1-177 CNFNIIE---SFTELARIVLLR CONSENSUS/80% ps.sVpp...sF.tlhpplht. CONSENSUS/65% sshNVpp...uFpplspclhpt CONSENSUS/50% supNV-p...AFpplsccIhpp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |