RGSE_HUMAN_1/1- TFELELTALERVVRISAKPTKRLQEALQPILEKH-GLSPLEVVLHRPG------EKQPLD CONSENSUS/80% .hhhhhhs.tp.shl.s+ss.plp-hlt.hhth+.tl....h.l...........pt.ls CONSENSUS/65% hhhhlhLPspptshVts+suhslp-hLthhhch+.slp.ttshlhh........tcpsls CONSENSUS/50% shs+VaLPsspsolVslRPGcol+DsLpplLc+R.GLsPpsssVptst......p+KsL- RGSE_HUMAN_1/1- LGKLVSSVAA-QRLVLDTL CONSENSUS/80% hpp....l.t.pc.hlc.h CONSENSUS/65% hppshshlss.p-lhl-.h CONSENSUS/50% hcsssohLsG.cELllEpl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |