PHOP_BACSU KKILVVDDE----ESIVTLLQ------YNLERSGYD--------VITASDGE-------E CONSENSUS/80% .pllll-Dp.......hthht.......hhtt.th.........h..stss........t CONSENSUS/65% hplLll-Dp.....hhtphlp.......hLpptsht........lttspsut.......p CONSENSUS/50% h+lLlVDDc.....slpchlp......phLpppGap........VssAssGp.......c PHOP_BACSU ALKKAET--------------EKPDLIVLDVMLP---------------KLDGIEVCKQL CONSENSUS/80% shthh.t.................slllhDh.hP................hsGhphhp.l CONSENSUS/65% ulphhpp.................DlllhDlthP................hsGhphhppl CONSENSUS/50% Alctlppt...............sDLlllDlpMP...............thcGl-lsccl PHOP_BACSU RQ----------------------------QKLMFPILMLT----AKDEEFDKVLGL-EL CONSENSUS/80% pt...............................th.llhho. ..s.st...h.tsh.ph CONSENSUS/65% +p...............................phsllhlo. ..utsp.tthhpuh.ph CONSENSUS/50% Rpp.............................sssPllhLT. ..Apsspsstlcul.cs PHOP_BACSU GADDYMTKPFSPR-----EVNARV CONSENSUS/80% Gs.sal.Ksht.t.....tlhttl CONSENSUS/65% GussalsKPhs.p.....cLhttl CONSENSUS/50% GAsDYlsKPashc.....-Llspl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |