Consensus terms for the RFX5_DNA_bdg domain 

9598.ENSPTRP00000002192_from_396_to_614PGPGRAPPGGLTQPRGTENREVGIG-GDQGPHDKGVKRTAEVPVSEASGQDPPAKAAKQD
CONSENSUS/80%    PGPGpu.Psu.sQshuTENREVGIG.uD.GsHDKulKRTAEVPVSEASGQDPPAKAAKQ-
CONSENSUS/65%    PGPGpAPPGGLTQPRGTENREVGIG.GDPGPHDKuVKRTAEVPVSEASGQDPPAKAAKQD
CONSENSUS/50%    PGPGQAPPGGLTQPRGTENREVGIG.GDPGPHDKGVKRTAEVPVSEASGQDPPAKAAKQD


9598.ENSPTRP00000002192_from_396_to_614IEDTA-SDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGSGGEGNSAG
CONSENSUS/80%    hEDss.SDAKRKRGRPRKKsGGSGERNSTP-KSAAAh-SApuS+LPhETWuSttEus.hu
CONSENSUS/65%    hEDTu.SDAKRKRGRPRKKSGGSGERNSTP-KSAAAMDSAQSSRLPWETWGSGsESNSAG
CONSENSUS/50%    sEDTu.SDAKRKRGRPRKKSGGSGERNSTPEKSAAAMDSAQSSRLPWETWGSGGESNSAG


9598.ENSPTRP00000002192_from_396_to_614--GAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSRHTKEAEDKIPLVPSKVSVIKGS
CONSENSUS/80%    ..tsc+PGPhGpAE+tsVLspGQtDGsVSKGGRu.u.pcAKEAEDKhPlsssKVSVIKGS
CONSENSUS/65%    ..GsERPGPhGEAEKGsVLAQGQpDGsVSKGGRGPSupHAKEAEDKIPLVssKVSVIKGS
CONSENSUS/50%    ..GuERPGPtGEAEKGAVLAQGQ-DGTVSKGGRGPSSRHAKEAEDKIPLVTSKVSVIKGS


9598.ENSPTRP00000002192_from_396_to_614RSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKAT
CONSENSUS/80%    RSQK.uhplsKtEs-TAsQGsKsLKG+sLQuSLspEtKDPKAs
CONSENSUS/65%    RSQKEALpLsKuEsDTAsQGNKDLKGHsLQSSLspEpKDPKAT
CONSENSUS/50%    RSQKEALQLVKGEVDTAAQGNKDLKGHVLQSSLo+E+KDPKAT

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T