AGGL_RICCO/309- EPIVRIVG---------RNGLCVDVTGEEFF-----DGNPIQLWPCKSN---------TD CONSENSUS/80% t.hhh...... ......thslph.tt.... .......l.h.tspt.. .....t CONSENSUS/65% pshhhhhs... .....sshClss.sst... .......ltlhsCps.. .....s CONSENSUS/50% sshhtphu... ....tsspCLDssuss... .....tslsltsCsu.. .....s AGGL_RICCO/309- WNQLWTLR----KDSTIRS-------NGKCLTISKSSP------------RQQVVIYNCS CONSENSUS/80% .tQ.a.h.. ..tptthh........tthslsh.t..................l.h.tsp CONSENSUS/65% ssQhWphs. ..pptpl+........sphCLshss................t.ltlhpCs CONSENSUS/50% sNQpWshs. ..scsslRs......ssshCLssssst.............tsslplhsCs AGGL_RICCO/309- TA-------TVGATRWQIWD-------------NRTIINP----------RSGLVLAATS CONSENSUS/80% t. ........tphW.ht.. .........lhp.............thshph.t CONSENSUS/65% s. ......sssphWphpp. ......sttlhs...........tsshslsstp CONSENSUS/50% s. ......sssQcWphps. ......ssslpsh..........psstsLslss AGGL_RICCO/309- GNSG-------TKLTVQTNIYA---VSQGWLPT CONSENSUS/80% t...........l.h.t.p........tta... CONSENSUS/65% ss.........pl.hhpsstt.....sQpWhh. CONSENSUS/50% ssss.......pltltsssss....ssQpWphp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |