gi|2622106/1-23 GVEDRRVGSEVFDELTLKTLYKLANSGYLAVLN--GAVSTGKEANVFKG----------- CONSENSUS/80% ...phhs.t.shs.hshhhlhphhppshlttht..shlusGKEusVats........... CONSENSUS/65% thtchtshppshDspThhhlhphhspGhlptls..GhluoGKEusVa+u........... CONSENSUS/50% -pp-+tosppVlDs+TthsLhphls+Ghlssls..GslSTGKEAsVa+Ah.......... gi|2622106/1-23 ----------ITDTDDFVAVKIYRVATSDFKKMQYYIQGDPRFK-------VRTTNRRQL CONSENSUS/80% .............sst.hAlKla+hsh.tFpphppYhtsc.+hc........tp.s.pth CONSENSUS/65% ............ssspphAlKla+suhhsF+shccYlpu-hRF+.......hpchs.+pl CONSENSUS/50% ..........hpsssschAlKIYKoupssFKctc+YlsG-hRF+.......hp+pNhRcl gi|2622106/1-23 VQAWVNKEFRNLKRALEA-GVRVPEPVTARDNVLIMEFIGK-DGVPAPTMRDAPPEDPE- CONSENSUS/80% hhhhsc+EhcsLtch.t..hl.sPcPh.hppplllMpalut..thst.pL+cht.p.... CONSENSUS/65% lplWAcKEa+NLpRhhph.ulssPcPlthcpplLlMpFlGp.pthsuP+L+-hp.p.tp. CONSENSUS/50% l+lWAEKEaRNLpRltps.GlssPcPlsh+cNVLVM-FIGc.culPAP+LKDlshcpt-. gi|2622106/1-23 -------------------------------------------EALETIIEYMHRLYKGA CONSENSUS/80% ............................................ha..hhp.hcphap.s CONSENSUS/65% ...........................................phappllc.h++lYcps CONSENSUS/50% ...........................................clYspllcpM++LY+pu gi|2622106/1-23 RLVHGDLSFFNILNH-------CGEPVIIDVSQAMVLDHPLAGELLERDIENIIRDFRRI CONSENSUS/80% .lVHuDLSEaNhlhp.......tschhhIDhuQul.hpHP.uhphLphDl.Nl.paFp+h CONSENSUS/65% .LVHuDLSEaNlLhc.......ssclhlIDhuQuVphpHPhuhpaLcRDlpNl.paFp+h CONSENSUS/50% cLVHADLSEYNlLl+.......csKlalIDlSQuV-hcHPpul-aLcRDIcNIssFF+Rt gi|2622106/1-23 GVSVS----ADYIRERITG CONSENSUS/80% th........p.hhchlht CONSENSUS/65% slsp......c.hhchlhs CONSENSUS/50% Glssps....cpla-tIss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |