sp38783_1 KSTMHQLSD----SEIITGEEEEESIFSVRARLYVV--ADEKKTWKERGQGILKVNVPKQ CONSENSUS/80% .psh..h.p. ..ElpoGEEsEpshFp.psKLahh..tp.httacERGhG.lKl.hph- CONSENSUS/65% .cshh.Lsc. ..ElpoGEEsEpslFph+uKLata..ss-hppaKERGhGplKl.ppp- CONSENSUS/50% FKPllsLPD. .VEVKTGEE-EEslFSsRAKLYpa..ss-pKsWKERGlG-lKlLKsKD sp38783_1 RGSGSGRLLMRND-AVHRVIMNVPLFQGMSKKSLQIASASSGGSANYLKI-FVIENGKS- CONSENSUS/80% p..tphRllhRpc.thh+lhhNh.lh.shphp.h..t........p..hh.h....uct. CONSENSUS/65% p..tphRllMRp-.tsh+lhhNh.lhtsMplp.htss........pshhh.hstshu-s. CONSENSUS/50% c..s+sRIVMRRD.uVLKVCANapIssuMoLcshssu.......s+shsa.sspDFuDst sp38783_1 ---VLYAVRVKDNSLAEQ--LRNHVLEA CONSENSUS/80% .....hhh+ht..p.upt..apphhpcs CONSENSUS/65% .t..hhhh+htpt-.upp..Fpphhp-s CONSENSUS/50% scscphAlRFKsp-sA-p..FKsll--A
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |