S30356/1-245 VMDIDYVELARQLTLREFKLYCKITKFACLAKVWGKKSGLSESID----------SITQF CONSENSUS/80% hh.hps.plApplohh-hpha.pl...chht.hhttp..................slpth CONSENSUS/65% lhphsshclApQLThh-hplapplp..-hlsphhspppptt.t............slpth CONSENSUS/50% llslssp-lAcQLTll-acLFpcIs.pEhlsplaspcsppsss............slcph S30356/1-245 IKASNQLTNFVGYMILRKAD--------------PKKRVQIIRYFIQVADKCRQ-YNNFS CONSENSUS/80% hp.hNphs.hl...lh.p.p...............p.RhtllptalplAt.hhp.hpNhs CONSENSUS/65% lpthNpls.aVspplltpss...............ppRspllp+aIplApch+p.lpNas CONSENSUS/50% lppFNslopWVsspILppss..............sccRAcllp+FIcVAccC+c.LpNFN S30356/1-245 SMTAIISALYSSPIHRLKKTWEYMNADA----LSNLKNMNKLMNSS---RNFNEYRDVLK CONSENSUS/80% ohhulhtuLppssl.RLp.sat.l.tt.....hphhpphpphhp.....tphtthRthlt CONSENSUS/65% ShhAlluuLpsssltRLcpTWptlspp.....hphhppLpplhssp...pNappYRphlp CONSENSUS/50% SlhAIlouLsoosIpRL+cTWsplssct....p+haccLscLhssp...cNapsYRctLp S30356/1-245 FIG------------------------------SEPCVPFFGVYLS--DLTFVYHGNPDY CONSENSUS/80% th..................................hlPhhshhLp..Dlhhh.ps..sh CONSENSUS/65% phs...............................ssslPahGlhLp..DLshlcpusssh CONSENSUS/50% shs...............................sPslPFlGlaLc..DLsalcpGssca S30356/1-245 LYNRT----------------RQVNFAKRAKTSEIV--SGIDRFKT--TGYNFQEV---- CONSENSUS/80% ht...................thlNhpKhp..hphl..tth..hpp..t..pht...... CONSENSUS/65% hp...................shlNFpKhpphhpll..pplphhps..pshshp.p.... CONSENSUS/50% lcp..................shlNFsKhcplscll..sclpphQs..ssYslpss.... S30356/1-245 ---------PEIQKFLDAW-------------FEKCPTID---EQYQISLNLEPRE CONSENSUS/80% ....... ...h..hhpt.................h.p.....t.hthShthts.. CONSENSUS/65% ....... .pplpphhpt..............hp.hspt....p.aphShphEPts CONSENSUS/50% ....... .pclpphlps..............lcslscpp...ctYpLSlclEP+s
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |