D4JTD2_9FIRM/6-190K......EKETRTRSWTFVLYP..ESA.PADWRD....KLDDYHIEWVESPLHDRDL.N. CONSENSUS/80% ...........+tRpashlhYs..ESh.Ppsap-....hlpp.th.hhhSPLHD+Dl.s. CONSENSUS/65% h..........+sRpasallYP..ESs.PcsWp-....hLpphtlshshSPLHDKDl.s. CONSENSUS/50% h......pK.pRuRsWAaVlYP..ESl.PcNWpD....lLccpGlPhAlSPLHDKDL.N. D4JTD2_9FIRM/6-190GDG.TPKKPHIHVLLSFGSVKSYDQVKE.ITDSLTCPI.PQRCH....SLRAMVRYMAHI CONSENSUS/80% ssG.p.KKsHaHllhhacsshohppltp.ltcthtts..sthhp....shpshhpYhhHh CONSENSUS/65% ssG.p.KKsHYHlllhacsspohpplpp.lpctltss..sphlp....SlcuhacYhhHh CONSENSUS/50% ssG.chKKAHYHlIlpF-uPsThcsVc-hls-sLsssh.sphlc....Sl+GhYRYLsHc D4JTD2_9FIRM/6-190DN....PEKAQYSKEMIIAHGGADLDEYLRPSASCELTYVKEMLDFVQ.....TNHI... CONSENSUS/80% ss....s-KhpYs.p-l.hhssh-hp....lss.sh.phlpcl.shIp.....ppsl... CONSENSUS/65% ss....P-KhQYs.c-l.hhsGh-lpph..lsst-htphlp-lhshIp.....ppsI... CONSENSUS/50% DN....PEKaQYSscDIpsasGFDl-ch..LoupDcpchLcEIp-hIc.....cNcI... D4JTD2_9FIRM/6-190................TEFFEL...VDYARENEFDT..WFSFLSRHSC........YMII CONSENSUS/80% ................hphh-L...lchh..tt........hh.pps.........hhh. CONSENSUS/65% ................lpat-L...lcahhtpp.....hh.hh.ppo.........hah. CONSENSUS/50% ................IEasEL...lDYhppssht...haslssssT.........lahs D4JTD2_9FIRM/6-190NYIKSSRY CONSENSUS/80% phlppp+. CONSENSUS/65% shlpSpRa CONSENSUS/50% oYIcS+Ra
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |