Q6JL80_9VIRU/4-189FYEVIVRVPFDVEEHLPGISDNFVDWVTGQIWELPPESDLNLTLIEQPQ...LTVADRIR CONSENSUS/80% hachllp...........losshhshhsst.Wp....s.hphp..p.s....lphsp+l. CONSENSUS/65% hacsllp...........lSsNFlsasssphWp....uhhsL-ps-hPp...LTss-+lh CONSENSUS/50% aYclVI+hP.-h-tplPGlSsNFl-als-shWs....uhhsL-psDhPp...LTssERLh Q6JL80_9VIRU/4-189RVFLYEWNKFSKQ.ES.....KFFVQFEKG..SEYFHLHTLVETSGISSMVLGRYVSQIR CONSENSUS/80% t.hl.phsth.t..ts......aFhQhEts..pthhHlHhlltts.lpshsl...hstlc CONSENSUS/65% shalschsshhcsPsu.....caFlQhEps..-phFHlHlllussslsshsl...ssplc CONSENSUS/50% slals+WushscsPsus....+YFlQsEps..-stFHLHVlIussulsstsLG+asopIc Q6JL80_9VIRU/4-189AQLVKVVFQNIEPRINDWVAITKVKK..GGANKVVDSGYIPAYLLPKVQPELQWAWTNLE CONSENSUS/80% t.h.pslhphhp.ph.s.hh.sho+p...Gt.hh.s.sal..YLh.Kh.Ppl.auhTNh. CONSENSUS/65% sths+slachspPplsshFtsshoKK...Gt.phsu.saIssYLhPKl.Ppl.WuhTNlp CONSENSUS/50% ssllKVla-sssPslsstFssuKTKK..GGps+scutsYIssYLlPKlpPpVQWAaTNl- Q6JL80_9VIRU/4-189EYKLAALNLEERKRLVAQF CONSENSUS/80% ta..ss.pht.Rpphhtth CONSENSUS/65% EYthsC.sLphR+phhcpa CONSENSUS/50% EYptsClsLsaRKslt+pa
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |