381666.H16_A0636_from_19_to_16SFLYSNCADG-QP--------------AMMDELQTAREA--------GYGVDAR------ CONSENSUS/80% hhhYhRhSst.pp..............shttQht.htth........sht.......... CONSENSUS/65% shhYsRlSop.pp..............slptQhptlpph.h......uhp.......... CONSENSUS/50% ssuYsRVSTc.cQtt............ol-sQpctlcsa.sppp...Ghcls........ 381666.H16_A0636_from_19_to_16HAFWEEEPAS----VPALQ--------RPRLRALQ-----HQVQPAD------------- CONSENSUS/80% ..a.-...hSu...ht...........R.thtphl.....t.hpttp............. CONSENSUS/65% .hat-p..hSG...tphp.........Rsthpphl.....pthcpsc............. CONSENSUS/50% plasDc.shSG...sstp.........RPsLpclL.....sslcsGchp........... 381666.H16_A0636_from_19_to_16--------SVVSLRLCSLGWSVP-EVLATIRRFRLLG--VALYCVQ-------LSRDD-L CONSENSUS/80% ........hllshphsRhuRp...ph.thhp.h.ths..hthh.hp.............. CONSENSUS/65% ........hlllhcl-RLuRshh.chhphhphlppps..lplhshp.........pth.. CONSENSUS/50% ........sllVtclDRLuRssp.-hhpllcpLpccG..lplhsls.........psh.. 381666.H16_A0636_from_19_to_16ANTTPPE-----------AVEVLR--AVAAL--EGAAR---SVRVRESLAAAKA------ CONSENSUS/80% ......t..........hhhthhs...hsph..ptp.h...tp+httshtttht...... CONSENSUS/65% sttssts.........phhhplhu..shAph..Epphl...tcRhptuhttttt...... CONSENSUS/50% ssssssu.........clhlslhu..ulAch..Epcpl...s-Rs+sGhpptpp...... 381666.H16_A0636_from_19_to_16MGRQ CONSENSUS/80% pGhh CONSENSUS/65% pGth CONSENSUS/50% cGch
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |