274854.MG2_0759_from_11_to_79GSS---------PRYRVASHRF--PGANRMPRVSDV--------------------VGEI CONSENSUS/80% GRs.........s.h+hss+th...ttthhhhhl-htc...................shV CONSENSUS/65% GRs.........sph+hss++p...ttctcaRhlDapcpp...............h.uhV CONSENSUS/50% GRs.........ssGRlosR++.GGGsKp+YRhlDF+Rpcts.............lpGpV 274854.MG2_0759_from_11_to_79TELVHSP------------VHSAPLARMKLPD-------------------------GET CONSENSUS/80% .pl.aDP............sRsu.lAhl.hts.........................t.. CONSENSUS/65% hpIpaDP............sRsA.lALltats.........................Gpp CONSENSUS/50% pcIEYDP............sRoAsIALVpapD.........................Gc+ 274854.MG2_0759_from_11_to_79-------------TLVVATEGLAIGSAVAI CONSENSUS/80% .............thhlsspsh.hGphl.s CONSENSUS/65% .............pYllAscGhpsGphlhs CONSENSUS/50% .............cYIlAP-GlplGDpltu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |