45351.NEMVEDRAFT_v1g240738-PA_from_15_to_122QKKFIR-HQSDRYM-RVG-------------------ESWRKPKG-IDNRVRRRFKGQYL CONSENSUS/80% p.pFhR..p..chh.+lt....................sWR+P+G.hcsphRpph+ut.. CONSENSUS/65% p.cFhR.pppc+ah.+lp...................psWR+P+G.lDs+hR++h+Gphh CONSENSUS/50% sp+FpR.apSDRat.+lc...................ssWRKPRG.IDN+lRR+aKGpss 45351.NEMVEDRAFT_v1g240738-PA_from_15_to_122---MPNIGYGSNKKTRFLM------PDGFKKFVVHNVKELEVLMMMN-RSYAAEIAHN-V CONSENSUS/80% ...hsphGYtospts+thh......PsGh.phlVps.p-L-hl...p.pphh.cIuts.V CONSENSUS/65% ...hsplGYtSs+ps+thh......PSGapchlVpNsc-LEhL..ss.pphs.cIAps.V CONSENSUS/50% ...MPsIGYGSsKcTRalp......PSGFcclLV+NlK-LEsLhhss.+pasucIA+s.V 45351.NEMVEDRAFT_v1g240738-PA_from_15_to_122SSRKRKAIVERAQQLSIKVTN CONSENSUS/80% u.+p+htlhp+Atphsl+lhN CONSENSUS/65% us+KRttIlc+AtpLul+VhN CONSENSUS/50% uu+KRppIlcRAppLuI+VsN
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |