639282.DEFDS_1746_from_3_to_97RYTGPVC---------KLCRREG-MKLYLKGERCFKDKCAFE-------------KKGYP CONSENSUS/80% +hht............+h.+p....................................... CONSENSUS/65% +hpsshh.........KlsR+.u...l...............................hs CONSENSUS/50% RapGPct.........KlsRR.G.hslhhp.ttt.tpt.................++shs 639282.DEFDS_1746_from_3_to_97PGQHGQMRKKI--------SDYG--LQLREKQKVKRIYGV-LERQFRRYFDRATRMQGI- CONSENSUS/80% st.................ppat...plhccp+hhhhYul..ccphtphht.utphpt.. CONSENSUS/65% PG.pt.tpht.........S-Yu..hpLpEKQKl+thYGl.hE+QacphappAt+hcGh. CONSENSUS/50% PGpHGpt+p+h........S-Yu..lQL+EKQKl+thYGl.pE+QF++YaccAs+h+Gs. 639282.DEFDS_1746_from_3_to_97-----------------------TGENLL------------------------------- CONSENSUS/80% .......................sut.ll............................... CONSENSUS/65% .......................TGp.Ll............................... CONSENSUS/50% .......................TG-sLL............................... 639282.DEFDS_1746_from_3_to_97--QLLE CONSENSUS/80% ..thlE CONSENSUS/65% ..plLE CONSENSUS/50% ..pLLE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |