Consensus terms for the Rtt106 domain 

5476.CAL0005561_from_361_to_455QAG------------VPCSVKASEGYLFPL------DRCFLF-VTK---PTLYIPYSEI-
CONSENSUS/80%    ..t............l.tt....pshlh.h......tpshh..hph...P.hhh.hpcl.
CONSENSUS/65%    h.u............Vtsph...pshLhsh......ppshla.hcp...P.hhlphs-l.
CONSENSUS/50%    tsu............VsspptupsGhLaPL......scsllahlcK...PslhIsh--I.


5476.CAL0005561_from_361_to_455--------SSVVMSRTG-G---GVSASRTFDLEVNVIG-------------------SNQ
CONSENSUS/80%    ........p.hph..............psFsh.h.h.......................t
CONSENSUS/65%    ........phlpatR........shtt+sFDhslhh.......................p
CONSENSUS/50%    ........-sVsFpRh......sshsp+oFDlslsh......................sc


5476.CAL0005561_from_361_to_455PHV-----FSNIDREEQEFIE-SFCKEKGVKVKNE
CONSENSUS/80%    php.....hs.l..ppht.l..palppttl.htp.
CONSENSUS/65%    sap.....hssIsppphptlp.palpppplphppt
CONSENSUS/50%    -as.....FusIspc-hcslc.-aLcspslchpss

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T