O66484/1-65 RRLDNVVYRL-GFAST--RRQARQLVAHGHVLVNGKKVN--------------------- CONSENSUS/80% .tlp.hlhp...hh.o..htthpphl.pttlhlstthh...................... CONSENSUS/65% hRLDhhltph..hsho..+ppspphIppGtVtlNsphsp..................... CONSENSUS/50% tRLDplLsct.hhssS..RspAcclIppGpVpVNGcpls..................... O66484/1-65 -----IPSYLV----EPGDVIEIKEK-------SRDIPFIKENLE CONSENSUS/80% .....t.th.l....t.tp.l.h...............hh.t.h. CONSENSUS/65% .....psshhl....p.s-hlplpt............thhhptht CONSENSUS/50% .....csuhpV....pssDplslpp...........hphltpplp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |