228405.HNE_0089_from_89_to_149LSYQVYTQSA--QVWGNGVQGSTINDFFLL-----GLLARSR----AHPI--TGTI--PA CONSENSUS/80% lsYplapssshs..hsssss.th.............ssu.s.....shsl..autl..st CONSENSUS/65% lsYpLYpDuuhophWusssssshs...........sususst....slsl..Yupl..ss CONSENSUS/50% lsYsLYpDuu+oslWGsusssssshs.........suoGssp....slsl..YGRl..su 228405.HNE_0089_from_89_to_149NQQ---VNSGS-------YSDAVTMT CONSENSUS/80% tt....sssGs.......YpDsl.hs CONSENSUS/65% tss...sssGs.......YsDTlslT CONSENSUS/50% sss...ssAGo.......YoDTlsVT
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |