AGRI_CHICK ATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRNSDVKNDFKSI CONSENSUS/80% ...thth.h.h.......h.assphtc.po..atpl.pphpphh.phatt.....tahsh CONSENSUS/65% st.shssshhhhpht.ppl.asssLpDPsSshapELtcslpphhtplapps....sFhsl CONSENSUS/50% ssposssulhhlssphpslpYossL-DPsSshYpELs+clsctlsplYsps...ssFlGl AGRI_CHICK RVRDLGQSS---AVRVIVESHFDPATSY---TAADVQAASLKQIRASK-KRTILVKK--- CONSENSUS/80% p.hphpssp...hhhp.shhhptss........ttlttth.phhpt....hshthpp... CONSENSUS/65% plhchpsus...sslshslhappssh......stsVpsphhphhppst..hslslss... CONSENSUS/50% cllcFcsGS...lVV-hslsFc-usss.....ussVcsshspttpput.pasLsIsc... AGRI_CHICK PQQEHVKFMD---FDW CONSENSUS/80% ...pssch.....sp. CONSENSUS/65% ..spls-h....sspp CONSENSUS/50% ..ssVs-lshssoAso
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |