4437/1-0 EKPLIAKFYPQYYH----KTDKDGRPVYFEELGAVNL-----HEMNKVTSEERMLKNLVW CONSENSUS/80% ..t.h.hhh.t.........sppsp.lhh...t.............t.ht.pphhphhh. CONSENSUS/65% phphhtthh.sh........Dcpupslhh.hhtth...........pphs.pchhphhlh CONSENSUS/50% chcstptahsush......hD+cG+PVhlhpsuphs.........hpspspcchl+hhlt 4437/1-0 EYESVVQY-RLPACSRAAGHLVETSCTIMDLKGISISSA------YSVMSYVREASYISQ CONSENSUS/80% .h-thht...............t.hhhlhDhpsh..............ht.ht.hhphht CONSENSUS/65% hhEphhpt..........stt.pthhhlhDhcshsh............hphhpthhphhp CONSENSUS/50% hhEpslpp.........hssshsshshlhDhcGhshtp.........shssh+phlpllp 4437/1-0 N-YYPERMGKFYIINAPFG---FSTAFRLFKPFLDPVTVSKIFILG-------SSYQKEL CONSENSUS/80% t..asp.ltthhhlpssh....h.hhhphhp.hlp.thht+hhhh..............h CONSENSUS/65% s.taP-pltphhllpsPh...hh.shaphhpshlstphppKlhhht..........hppL CONSENSUS/50% c.pYPEpLppllllNsPt...hhpshaslh+sFLsscT+pKlphls........phtppL 4437/1-0 LKQIP--AENLPVKFGGKSE------------ CONSENSUS/80% hp.ht...ptls..htu...... CONSENSUS/65% hphls...pplPtthGGp.p... CONSENSUS/50% tcal-..pcpLPsphGGsss...
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |