A2AP_BOVIN TDLFSLVAQSST-R--PN-LILSPLSVALALSHLALGAQNQTLQRLKEVLHADSG----- CONSENSUS/80% hplaptlh..p.....pN.lhhSPhulssshuhl.lGstspTtppl.psltht....... CONSENSUS/65% hsla+plsptsss...pN.lhhSPlSIuouLuhlpLGupusTtpplhcsLpas....... CONSENSUS/50% hsLY+pLsppsss...cN.IlaSPlSIuoALAMLuLGA+GsTcsQltcsLpFshh..... A2AP_BOVIN ---------------------------------PCLPHLLSRLCQDLGPG---------A CONSENSUS/80% ...................................htt.htpl.pph.t......t..h. CONSENSUS/65% ...........................t.p....plcpshppLhpplsps.....sp.hp CONSENSUS/50% ...........................psct...clHpuFpcLhpsLscst....sp.hp A2AP_BOVIN FRLAARMYLQKGFPIKEDFLEQSEQLFGA---KPMSLTGMKGEDLANINRWVKEATEGKI CONSENSUS/80% hphsstlahppphph.tpFhtthpphats.t...hsFtp..t.shp.INpaVpptTpGpI CONSENSUS/65% lphustlahppshphhppFhppscphYps.chtslsFpss.p.upptINpaVcptTpG+I CONSENSUS/50% LssuNsLFlccslclp-cFlpcsKchYpu.EspslDFs-stctA+cpINcaVccpTcGKI A2AP_BOVIN EDFLSD---LPDDTVLLLLNAIHFQGFWRSKFDPNLTQR-GAFHLDEQFTVPVDMMQALT CONSENSUS/80% .phltt..hp...ThhhllNhlaF+u.Wpt.Fp.p.Tpp.t.FhhspppshtV.MM...t CONSENSUS/65% scllpp..lc..sThhlLVNhlaFKGpWcp.Fp.ctTpp.psFalscspolpVsMMtpps CONSENSUS/50% s-Llsc..lDs.sTsllLVNsIaFKGpWcpsFcscpTcc.csFals-ssoVpVPMMpppu A2AP_BOVIN YPLHWFLLEQPE------IQVAHFPFKN-NM----SFVVLMPTRFE---WNASQVLANLT CONSENSUS/80% ..h.hh..pp........hpllphsa.s.sh....ohhhllPpp.......hptlpt.ls CONSENSUS/65% .hh.hhpspphp......hpllplsYtG.sh....ShlllLPcc.....sthpplEptLs CONSENSUS/50% .phpascss-Ls......splL-LPYpG.sh....ShlllLP-c.....ssLpplEppLo A2AP_BOVIN WDILHQPSLSER--------PTKVQLPKLHLKY--QLDLVA-------TLSQLGLQELFQ CONSENSUS/80% .chhppa.t..ph........htlhhP+hp.....phsL..........L.thGlpchFs CONSENSUS/65% .chlpcWtp..phppp.....splhlPKhp..h..sasLp........hLtplGlsclFs CONSENSUS/50% s-plccWps..shppp....plcLaLPKFslph..sY-Lct.......lLpsLGlo-lFs A2AP_BOVIN --APDLRGISDE--R-LVVSSVQHQSALELSEAGVQAAAATSTAMSRMSLS--------- CONSENSUS/80% .ttushsthot...t.lhlsphhHpshlplsEpGspususshh.h..h............ CONSENSUS/65% .spADhSulop...psLhlSpslH+uhl-lsEcGo-AuuuTshhhh.hs........... CONSENSUS/50% .spADLSGlocp..psLplScslHKAslEVsE-GTEAAAATultssspS........... A2AP_BOVIN -------------------------------------SFIVNRPFLFFILEDSTSLPLFV CONSENSUS/80% ......................................hhhs+PFlhhlhcp.sts.LFh CONSENSUS/65% .....................................phphs+PFlahlhcp.TtslLFh CONSENSUS/50% .....................................plphD+PFLFlIc-spTsolLFl A2AP_BOVIN GSVRNP CONSENSUS/80% G+hhpP CONSENSUS/65% G+lssP CONSENSUS/50% G+VssP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |