YJK5_YEAST/1-13 ADIEVRKSS--NERDFGVFAADSCVKGE--LIQEYLGKIDFQKNYQTDP----------- CONSENSUS/80% ..h.h..t.....tGhulhsht.h..sp..hlhth.s.hh.................... CONSENSUS/65% hplplhpst...tpGhGlhutppl.tGp..hlhchhGclh.ptphppp............ CONSENSUS/50% pplcltcos...ppGhGlhupcsIscGs..hIhEYsGEllspppscpc............ YJK5_YEAST/1-13 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ YJK5_YEAST/1-13 ------------------NNDYRLMGTT-------KPKVLFHPHW--------------- CONSENSUS/80% .....................ht...............hhhph........... CONSENSUS/65% .....................hpp.t..........tphhhpht.......... CONSENSUS/50% ..................ppthcpps..........spahaclpt......... YJK5_YEAST/1-13 -------------PLYIDSRE--------TGGLTRYIRR---SC-EPNVELVTVRPLDEK CONSENSUS/80% ...........hhh-sh..........hshhphhsH .ss.pPNh.h..h...... CONSENSUS/65% ..........thhlDuth........hushs+alNH .SC.pPNs.hhhhhhps.. CONSENSUS/50% ..........shslDupp........tGNhuRFlNH .SC.sPNspsptstsss.. YJK5_YEAST/1-13 PRGDND-------------------------------CRVKFVLRAIRDIRKGEEISV-- CONSENSUS/80% .........................................hhhhs.c.I..spElhh.. CONSENSUS/65% ........................................plhlhuh+sIt.G-Elsh.. CONSENSUS/50% ......................................ph+lslaAt+cIcsGEELTh.. YJK5_YEAST/1-13 EWQWDLRNP CONSENSUS/80% sYt...... CONSENSUS/65% sYs.shttt CONSENSUS/50% DYshshpss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |