Consensus terms for the SF_P domain

PSPC_HUMAN       MDVGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVVLIVVVIVGALLMGLHM
CONSENSUS/80%    MDhGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVVLVVVVIVGALLMGLHM
CONSENSUS/65%    MDhGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVVLVVVVIVGALLMGLHM
CONSENSUS/50%    MDVGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVVLVVVVIVGALLMGLHM


PSPC_HUMAN       SQKHTEMVLEMSIGAPEAQQRLALSEHLVTTATFSIGSTGLVVYDYQQLLIAYKPAPGTC
CONSENSUS/80%    SQKHTEMVLEMSIGAPEsQQRLAhSE+hsTTATFSIGSTGlVVYDYQRLLIAYKPAPGTh
CONSENSUS/65%    SQKHTEMVLEMSIGAPEsQQRLAhSE+hsTTATFSIGSTGlVVYDYQRLLIAYKPAPGTh
CONSENSUS/50%    SQKHTEMVLEMSIGAPEAQQRLALSE+AsTTATFSIGSTGIVVYDYQRLLIAYKPAPGTC


PSPC_HUMAN       CYIMKIAPESIPSLEALNRKVHNFQMECSLQAKPAVPTSKLGQAEGRDAGSAP--SGGDP
CONSENSUS/80%    CYIMKhAPESIPSLEALsRKhQN......hpAKPAsPTSKLGQtEG+sAGSAs..SGtDL
CONSENSUS/65%    CYIMKhAPESIPSLEALsRKhQN......hpAKPAsPTSKLGQtEG+sAGSAs..SGtDL
CONSENSUS/50%    CYIMKMAPESIPSLEALsRKlQN......FQAKPAVPTSKLGQ-EG+DAGSAS..SGGDL


PSPC_HUMAN       AFLGMAVNTLCGEVPLYYI
CONSENSUS/80%    AFLGhAVSTLCGEVPLYYI
CONSENSUS/65%    AFLGhAVSTLCGEVPLYYI
CONSENSUS/50%    AFLGhAVSTLCGEVPLYYI

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T