SRC_AVIS2/1-91 EEWYFGKI-----TRRESERLLLNP----------ENPRGTFLVRESET----------- CONSENSUS/80% ..aaas.h.....sptpupphL.t...............GsallR.opp........... CONSENSUS/65% t.WaaGtl.....sRppAcphLpp..............pGsFLlRpSps........... CONSENSUS/50% psWaHGsl.....oRp-AEclLps............ttcGsFLlRcScs........... SRC_AVIS2/1-91 --------------------------TKGAYCLSVSDFDN-------------------- CONSENSUS/80% ............................tthslohh.t...................... CONSENSUS/65% ............................spasLSlhhp...................... CONSENSUS/50% ..........................psusasLSlppp...................... SRC_AVIS2/1-91 --------------------------------AKGLNVKHYKIRKLDS------------ CONSENSUS/80% ...................................tthhchhl...t............. CONSENSUS/65% ...................................spspHhplppps............. CONSENSUS/50% ...................................spl+HapIppsst............ SRC_AVIS2/1-91 -----GGFYITS------------RTQFSS--LQQLVAYYSKHADG CONSENSUS/80% .....t.h.htt...............a.s..l.pLlpha.tt... CONSENSUS/65% .....stahlst.............htFso..l.cLlpaapppshs CONSENSUS/50% .....spatlss............tppFso..Ls-LlsaYppssts
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |