O61080/1-59 GPEQARALYDFAA-------------ENPDELTFNEGAVVTVINKS-------------- CONSENSUS/80% ....hhshhsats.............tt.tclshptu-hl.lhpp............... CONSENSUS/65% th.hshAlasapu.............ppss-LshppG-hlhllpp............... CONSENSUS/50% ssppspAlYDYsu.............psscELoFccGDllpllccs.............. O61080/1-59 -------------NPDWWEGELN------------------GQRGVFP-----ASYVELI CONSENSUS/80% .............tttWh.sp....................tp.GhhP.....tsalp.h CONSENSUS/65% .............sssWatupht..................sppGhhP.....ssalp.h CONSENSUS/50% .............cssWWcGcps.................tGcpGhhP.....usYVchh O61080/1-59 P CONSENSUS/80% . CONSENSUS/65% . CONSENSUS/50% p
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |