290317.Cpha266_0504_from_519_tKSGIGCLSDLVSLDR---KHRKAVNAALGELLGYYICRTLDDAKQSIAALS-----RSDK CONSENSUS/80% .shhu.lhphhpht....tathAlphshGtthttllsps.t.u.thlthh.......... CONSENSUS/65% tulhGhlucLhplpp...paphAlpsshGsplpsllV-stpsAppslphhp.....ttth CONSENSUS/50% sGlhGslu-LlpVcs...cYcsAlEsALGusLpslVV-scpsApcsIphL+.....pppt 290317.Cpha266_0504_from_519_tGKVHFLVLELVQESVPKNR-AVPEN----------------------------------- CONSENSUS/80% ...thhshs.hp................................................ CONSENSUS/65% sphohlsLstlp................................................ CONSENSUS/50% GRsTFlPLsplcst...stt.tphht.................................. 290317.Cpha266_0504_from_519_t-EALRVIDLLQFP--------------------PELDNVLAL-----MLHETYLVRDLNA CONSENSUS/80% ..h..h.phlph..........................hht......hhupshlspshtt CONSENSUS/65% .hhthhhcllphs......................ht.shph.....lhussllscslpp CONSENSUS/50% sslshAh-Llchcsp....................hpsslph.....lLGsTlVs-sL-s 290317.Cpha266_0504_from_519_tAETLA CONSENSUS/80% A.thh CONSENSUS/65% Applt CONSENSUS/50% Apcls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |