Q13186/1-104 QQLFRDVEDE-ETWIREKE------PIAASTNRG--KDLIGVQNLLK------KHQALQA CONSENSUS/80% .th.tphpph..tWhtpht.......hhtptth...ts.tthpth.p......phpthtt CONSENSUS/65% ppahpchpph..tWlpctp......thhpspshs..pchpslpthhc......capshpp CONSENSUS/50% ppFtc-sc-l.psWls-p-......phlssp-hu..pDlsslcsLl+......+Hcslcs Q13186/1-104 EI---AGHEPRIKAVTQ-KGNAMVEE-----------------GHFAAEDVKAKL----- CONSENSUS/80% ph...tt.t.phptl.t..upphhtt.................t..tt..lttp...... CONSENSUS/65% -l...pspptplpplpp.huppLhpp.................tt.tstplppch..... CONSENSUS/50% -l...sspcsclpslpc.puccLlpp.................sptsuspIpp+l..... Q13186/1-104 -----------------------------------------HELNQKWE----------A CONSENSUS/80% .........................................ttltttap..........t CONSENSUS/65% .........................................pplpppap..........p CONSENSUS/50% .........................................scLspcWc..........p Q13186/1-104 LKAKASQRRQDLE CONSENSUS/80% l.thhtt+tttLt CONSENSUS/65% LpphhtpRpppLp CONSENSUS/50% LpctspcRcpcLc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |