O76580/111-231 NLEEFLEFLSEASEN-----ISR---PLALTTLFEDYKEHINYPQSVRILRKQLESNLLE CONSENSUS/80% p..phhpFLhppocs.....hcsh.....hht.atp.c.......p.thh.t+Fht.ls. CONSENSUS/65% phs+hhsFLlcpTKc....slcPhh.s.tlhppFschcs...th.s.psahp+FpppLAP CONSENSUS/50% -hsRhMcFLl-+TKD....ulEPls.s.plapcFuch-s..tsthosssYhpRF+ppLAP O76580/111-231 TISMSPNYYADRKAQMLFAMGLRVK-GEFLERLERN------------------------ CONSENSUS/80% .h.thspaslpp+h+hhauhssplp.psFLtphpt......................... CONSENSUS/65% phsphssYSl-pRlRlhFuhuucVp.s-FLpplcp......................... CONSENSUS/50% sMschssYSIEsRlRlMFALuGcVs.-DFLcpIcpp........................ O76580/111-231 --------------AVVEVDGYHRITFYKSKN----------LEFRG CONSENSUS/80% ..............uhVpLDc.pRI.pahSps........tthpLps CONSENSUS/65% ..............GsVpLD-ppRIs+asSp-........GplpLcu CONSENSUS/50% ..............GsVcLD-p+RIsKYsSsD........GpLcLEG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |