224308.BSU27930_from_73_to_187TPHLAFDFLTFNWKTHYMTLEYEVLG--EIKDLSAYDQKLAKLMRKLFHLFDQAVSRESE CONSENSUS/80% h.phu..hhTaNW.tp.h.LEYEVhG..t.tsLsth-ppL.phhpphhphhpttss.ts- CONSENSUS/65% hsphA.hhLTaNWps+.hpLEYEVhG..chpDLStYDppLsshspchhplhcppsstcsE CONSENSUS/50% sP+hAphlLTFNWcs+sloLEYEVLG..-l+DLSuYDccLsolsRcFFsLl-pslspcoE 224308.BSU27930_from_73_to_187NHLTVSLQTDHPDRQLILYLDFHGAFAD--PSAFDDIR--QNGYEDVDIMRFEITSHECL CONSENSUS/80% Nalslohph...p..hhlhhDapGhhtp...-tlpthh..tp....hplhpatlttpEhh CONSENSUS/65% NHlslolphstpc..lhlahDa+Gtlpc..h-slpsah..pstt.shclhpFplsscEhs CONSENSUS/50% NHLolTlplssc-..llLFFDF+Gslsc..hEulcsal.ccspssslclspF-ls-cEso 224308.BSU27930_from_73_to_187I CONSENSUS/80% h CONSENSUS/65% l CONSENSUS/50% l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |