Q29110/35-135 LRLVDGGS-----------YCSGSVEILHQG----SWGTVC--DDSW--------DLDDA CONSENSUS/80% lRLhsstt.............pGplElhhts....tWuslC..spta........s..pu CONSENSUS/65% lRLssGss............spGRVEVhhps....pWGoVC..ccsW........shpsA CONSENSUS/50% lRLssGss...........ssEGRVEVhhsG....pWGTVC..DDsW........shp-A Q29110/35-135 HVVCRQLGCGKTLSALG------------------SAHFGAGSG-----------RIWLD CONSENSUS/80% tlhC+pLGh.ts.th........... ........hs.sts............hhht CONSENSUS/65% pVlC+pLGhstuhps.t......... .....tshautuss...........slhhs CONSENSUS/50% sVVCRQLGausAsssss......... .....pupFGsGsG...........sIalD Q29110/35-135 DVNCTGKES-HLWQCPS---RGWGQHN---CRH------KEDAGVICS CONSENSUS/80% thtCpGtE..pl.pC.......ht.t....Ctp........ssulhC. CONSENSUS/65% plpCpGsEs.sl.pCtp...tshstps...Cs+......tp-AuVhCp CONSENSUS/50% sVpCsGsEs.oLt-Csp...sshusps...CsH......pEDAGVlCs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |