224308.BSU15950_from_22_to_103FKDGLEKTRN-SFQN--KVNDLVSR--YR-KVDEDFFEELEEVLISADVGFTTVMELIDE CONSENSUS/80% hhpsLtppht..htt..hhtthhht........pphhc-lc.hLltuDlshtss.phhpp CONSENSUS/65% hhpsLscphp.shtp..hhsphhhst....p..cchhcElcpsLlpADVulpsspcllpp CONSENSUS/50% hhcuLucohstslsc..hhupshlsc....csl--slcElcpuLLpADVulclsccllcp 224308.BSU15950_from_22_to_103LKKEVKR--------------RN------IQDPKEVQSVISEKLVEIY CONSENSUS/80% lppphh...............tt......htstp.hhphlhpplhphh CONSENSUS/65% l+pcsht..............ps......lpssptlhphlp-cLhpll CONSENSUS/50% l+c+sps..............cs......lssspplhcllc-ELlclL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |