rhogap_rat/1-20 HFLQDCVDGLFKEVKEKFKGWVSYP-----TSEQAELSYKKVS-------------EGPP CONSENSUS/80% .h..t...t.ht.hh.t...W.................hhth.................. CONSENSUS/65% .httpsttthhphhtsstttWhh..........pttttshpth.............tsps CONSENSUS/50% phpscsspshlppsssspcsWspss......ptcstpcshpphsss..........sucs rhogap_rat/1-20 LRLWRATIEVPA--APEEILKRLLKEQHLWDVDLL-----------DSKVIEILDSQ--- CONSENSUS/80% .+h.thh.......h...hh.t......tWpp.h.............hthlp.ht.s... CONSENSUS/65% h+hhshl.tss...hhtplhpsh.....pWcpsht...........tspslctlsss... CONSENSUS/50% hRstulVsssss.plsp-lhccsth.hhcWDcshs...........pspll-slsss... rhogap_rat/1-20 ----TEIYQYVQNSMA--PHPA-RDYVVLRTWRTN-------LPRGACALLFTSVDHDRA CONSENSUS/80% ....s.l.h...t..h...h.s.R-hh.lR.hp..... .....tt.hhlh..ohp..t. CONSENSUS/65% ....sslhhhhsphhh..slss.R-hlhlRhh+p.... ....spsshslsstSlsp.pt CONSENSUS/50% ....uslpahssssss.sPlsP.RDaVhVRpp+p.... ....sccsalllssSlspsss rhogap_rat/1-20 P------VAGVRVNVLLSRYLIEPCGSGK-----------SKLTYMCRADLRGHMP---- CONSENSUS/80% ........thhRsphh.shhhhp..tts............sphhhl..h-hts....... CONSENSUS/65% s.......shlRschhsothhlpspsss............splsal.ps-lputh..... CONSENSUS/50% ss....psuhlRucphPSGhlIcssusGh...........o+lsalppsDLcGpsP.... rhogap_rat/1-20 EWYTKSFGHLCAAEVVKIRDSFSNQSTESKD CONSENSUS/80% p.hhp.hht.th..hhp....htthpt.t.p CONSENSUS/65% phhhcshhppshh.hhct..hhstlpptstp CONSENSUS/50% ctll+slhssuhspss+p..phAsLpcssp+
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |