Q39489/1-181 PILDVDGDELRR--GHRYYAISERR----PVSGLTLAARSNA----PCPLNV-AQTSSN- CONSENSUS/80% .lhD.pGp.l.s..sspYalls........uGGl.hstht.......CP.sl.spp..p CONSENSUS/65% sVhDs-Gp.lps..GupYallsshhs...tGGGlphutsssp....hCPlsV.lQs.pc CONSENSUS/50% sVlDs-Gcslcs..GGsYYlLPslpu...sGGGlssAssssp....sCPLsV.VQoss- Q39489/1-181 ---DYGRPLAFFPE---NAEDDTVQEGNTLNIMFPEP---TECRAST------VWTLDRE CONSENSUS/80% ..p.G.Plhhts......t..l.p.t..lpltFt.......C...........Wpls.. CONSENSUS/65% .hppGhPlphps......pt.lhctss.lplpFss.....hCs.ps......hWplspp CONSENSUS/50% .lspGhPlpFos...sspsssIlcsus.lsIpFsss...shCspos......hWsVscc Q39489/1-181 R---GVVTTGGTSSS----AIGPHN---SRFSIRRAGDASSERERKYQIEVCPCSNGV-- CONSENSUS/80% ......tt.hlthut......s..p....hFplpcht.........YKLhhC........ CONSENSUS/65% ......tthhlphus....t.st.s...shF+Ic+hs.....t.tsYKLhaCs....... CONSENSUS/50% t...tspphsVplGG....pssstc...uhF+IE+su....tp.ssYKLlaCsp.t.... Q39489/1-181 -PRPSCRMACVGSLGLTED---EGNLLLNIN-----NERPHAIRFVKVK CONSENSUS/80% .........C.tslGh..p...tshttLsls......ppsh.lhF.cst CONSENSUS/65% .....t..tC.tslGhhhs...putpRLslo.....pppshhVhFpKsp CONSENSUS/50% .....ppspC.sslGlhpD...cGsRRLllo.....pcsPLsVhFpKsc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |