Q09646/1-80 QPMKFKLHPRLAKVLGI--AAETRPRIIEALWQYIKTHKLQDPQDRDTINNDLFL-EQCF CONSENSUS/80% .sp.hhlSstLtthlG...t.hsRsphl+tlWtYIKtpsLQsPps+c.I.sDphL p.lF CONSENSUS/65% .sp.hplSspLtpllG...tthsRspll+tlWpYIKppsLQsPps+cpI.sDptL ctlF CONSENSUS/50% hs+sspLSscLAcllGs..splsRs-llK+LWpYIKcHsLQDPpNK+pIlCD-KL cpIF Q09646/1-80 GVS-KMRFMEIPQRLHQLLQQPDP CONSENSUS/80% thp..hphhthsphls.hhh.... CONSENSUS/65% ttp..hphhphsKhLsthhh.... CONSENSUS/50% usc.phcMFpMsKhLspHlhp.c.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |