337760/61-138 LPC-DICKDVVTAAGDMLKDNAT--------EEEILVYLEKTCDWLPK----PNMSASCK CONSENSUS/80% ..C..hC..hhp.htt.htpt............tl.thhtt.Ct.h........htt.C. CONSENSUS/65% ..C.thCp.hlpthpphlppsts.........tplhphlpphCphhs.......hpp.Cp CONSENSUS/50% ssC.plCcplVsplpshlcssps........ppslpctlcpsCspls.....tshsspCc 337760/61-138 EIVDSYL-PVILDIIKGEMSR----PGEVCSAL---NLC CONSENSUS/80% thlp.hh...hhp.h.t........sp.lCt.l...thC CONSENSUS/65% phlppah.s.llphltpths.....PptlCptl...thC CONSENSUS/50% plV-pYt.spllphlpsphs.....PcslCppl...shC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |