170187.SP_1759_from_226_to_338SPRVQSNYYAIIDTLVTTLVEGE----------------------DYIFKEEKEEVWLTT CONSENSUS/80% .spptsphY..hsphh.pL..........................ca.lDcct+pl.lo- CONSENSUS/65% ss-csochYhphspls.pLppt......................tDaplDEKs+plhLTE CONSENSUS/50% su-cso-LYppsscllspLpcpt.....................sDYplDEKs+sVtLTE 170187.SP_1759_from_226_to_338KGAKSAENFLGIDN--------LYKEEHASFARHLVYAIRAHKLFTKDKDYIIR-GN--- CONSENSUS/80% tGhtthEphht.ts........Lap.tph.hh+al.tuL+Ap.lhp+Dh-YlVpss.... CONSENSUS/65% pGhp+sEchhthps........LYsspNhtlhHalppAL+A+tLap+DhDYlVpcs.... CONSENSUS/50% cGhcKlEchLshcs........LY-spNhsLlHHlspALRAHpLFcRDpDYlV+DG.... 170187.SP_1759_from_226_to_338---EMVLVDKGTGRLMEMTKLQGGLHQAIE CONSENSUS/80% ...pllIlDcaTGRhh.GRRaS-GLHQAlE CONSENSUS/65% ...cVlIVDEFTGRhM.GRRaS-GLHQAlE CONSENSUS/50% ...EVlIVDEFTGRlMsGRRaSDGLHQAIE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |