195103.CPF_2160_from_3_to_120/NVAIVGATGNVGRKFLEILE------ERNFPVKELYLFASKRSAGKTLKFK----GEDVL CONSENSUS/80% plullGusGhsG.thhphlt.........h.l...hs.t...ttut.ht.h......... CONSENSUS/65% plullGAoGhsGtpllclLttc......phplsthhstp...psGppht.h....tt... CONSENSUS/50% +VuIlGAoGhsGscLl+lLppHs.....phclsslhssst.psAGcslsphhs.htsth. 195103.CPF_2160_from_3_to_120/VEELCEANIENK-----------------KIDFALFSAG---GSVSLE-----FAPIFAK CONSENSUS/80% ..............................hDlhhhshs...s...h............. CONSENSUS/65% .t.hs.t.......................hDllhhuhst..utthh.......h.hh.. CONSENSUS/50% hpshshssh.....................sDllFhAsPpshupssss.....htttuht 195103.CPF_2160_from_3_to_120/HGAVVIDNSSAWRMDKE---------------------------VPLVVPEVNPEDVKWH CONSENSUS/80% ...hllD.uusaRhp.............................hshslsElt.pthtth CONSENSUS/65% ..hhVlDhousaRhpss...........................sshslPEls.cplttt CONSENSUS/50% .tshVIDsSusaRhcss...........................ssYulPElNs-plcss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |