Q22871/1-0 EIVYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETR-----------DPIPV CONSENSUS/80% ..hhhl.SsDsp.h.lppthh..S.hltphlpp.s.tt...................l.l CONSENSUS/65% tphlhLhSoDsc.FplccpssppSthlpphlps.shspt..................IPl CONSENSUS/50% sphlpLpSSDGcsFpV-cclAppSpsIsshlc-sussst.................sIPl Q22871/1-0 TNVNGKTMAKVAEWCEKHKADAIPEDNMN------------------------------- CONSENSUS/80% .plputhlphllcasph+htt....................................... CONSENSUS/65% .sVsuplLpKVlEaCc+Htpss...................................... CONSENSUS/50% sNVsusILsKVIEWCc+Hpc-sss.tpt................................ Q22871/1-0 -VLKTLTIPEWDQKFLK--IEDEALFDLILASNFLDI CONSENSUS/80% .......h.paD.cFhp..lp.thlh-llhAushLpl CONSENSUS/65% ....p.plspWDtcFhc..l-pphLF-LlhAANaLsl CONSENSUS/50% ...ppp-lssWDscFlK..lDpssLF-LIlAANYL-I
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |