Q6C895 VGDLGSPAV--PSDSLTMTRFLQMIDMQFMD--DFLLPGKRQPNPDV------------- CONSENSUS/80% hsppsp.......p.lpLppFLp.hslpFh-...hph..pp................... CONSENSUS/65% hsppsp.....phpsloLpcFLshsslpFh-...hssht+cpstsst..pth........ CONSENSUS/50% lDc-scss...ss-sISLQDFLsMTuI+FME..slsspcR+sssPusspssh........ Q6C895 ---SKCSLAQYLVNSYLH-PHVQLYSWAVEHLRKDIEVRSA---NFAQLDQETLNDVPP- CONSENSUS/80% ...pp.phpphh.u.h.phPhLElhtatspcLpp.I.pupp...hhpphptph..psP.. CONSENSUS/65% ...cshshcphhsAhhhplPhLElYpasscELpchIppu+p...lhppl-ppshtssP.. CONSENSUS/50% t.p-csol-cslsAtasslPhLELYsFSC+EL++pIsEGRc...ll+-IEs-Ths-NPP. Q6C895 IFVDYTSADSGVKLLLNKQFALDKQYYRVEARKSWYEWRKSISIDLYKRLATNRDLLRSD CONSENSUS/80% lhhcYhtussph+.hhppph..hKtas+L.uct.WY-WR.ph.pslh..L.p.ht.htt- CONSENSUS/65% LFp-Yhsussch+hLhcppht.lKsauRLpuKthWYEWRhplhcGl+ptLtcphpthpp- CONSENSUS/50% LF+EYhoAos-sKlLM-sQFpsVKsaARLpSKcsWYEWRpKLLEGLKcsL-csl-sMcpD Q6C895 LKVIDQESETVSTEVADLKQSLDVSNSQLTQLKNLSTDV------ELKRQVCSELQLVQQ CONSENSUS/80% .t.l.t..p.lpshh.tl.th.tsl.ppht.Lpph.p.htp...s.htthp.tcltt... CONSENSUS/65% hphlhcp.phlsslh.plpphhpsLpcchppLpphtp-hpshc.s.Lpth+.pclpphpp CONSENSUS/50% cplLsKcpsllsslhscLp-+psuLpcElspLcplscElpssDss-Lsst+.-cLpsppc Q6C895 QLMPLVDKLEQVNLTVVELESEVAKEVQKQDEIKTQLMEQQKRLLDNRHIDFREIEQLQE CONSENSUS/80% ph....pphtphppphpphp.tltp.tt.h.ph.tpltp.pp.h.ppc.hp..-l.pLp. CONSENSUS/65% pht.phpplpplppphpphptplpphspphtph.spIsphcphhpcs+tashp-lppLpt CONSENSUS/50% -lphKppclsELppclppLsscIsctsspKp-lps-Is-s-+hhccs+saotcEIpcL+p Q6C895 QLKKTEQKKGLKLARFEPNGDAVFESRDLCMTV-SRNSNLVVA CONSENSUS/80% php.hpt.pshthhth.........s.hh.hsh.ptph.h.h. CONSENSUS/65% phphlpphpGhphhphp........sshlphsa.pppltlthp CONSENSUS/50% plcpLEppoGWsls+ho........GssLohoY.ccclpLsFc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |