160488.PP_4879_from_6_to_81KIYGVHAVQALLQHH---------PKRVKQIWLSEGR----------SEPRLETLLALAA CONSENSUS/80% hl.Ghp.l.thlptt............h.plhhttt........................ CONSENSUS/65% hl.Gh+sl.tALpss..........ttlpplhhspt.............t.h.th...ht CONSENSUS/50% llhGh+sVp-ALcss..........pslpclalscsh..........ttppttphhphhp 160488.PP_4879_from_6_to_81----ENRVPVGQAER---REMD-AWV-----EGVHQGVVAEVSPSQVW CONSENSUS/80% .......h.h..hs....p.hpthst.........pGlhh.ht..t.. CONSENSUS/65% t......h.l.hlsp...ptlsphss.....ttspQGlhuhsp.hphh CONSENSUS/50% p...tttlplptVsc...cpLcplus.....sssHQGllAplsshphs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |