Q9NTV0/43-214 PDLQALFVQFN-DQFFWGQLEAV--EVKWSVRMTLC---AGICSYEGKGG--------MC CONSENSUS/80% .pltthh.ph...thhtpth.....ph.ap.+hhps...usth................. CONSENSUS/65% tcLpphltphs..phFtpphtp...plhastRhpss...uGthh..............ps CONSENSUS/50% pcLppplpphs.hphFscsapc...clsWspRh+ss...GGpah.............pss Q9NTV0/43-214 SIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDR-EGHG-PEFCKHMHRINSLTG CONSENSUS/80% plchs..hh..t..t.h.thl.HEhsHhhha....tchh...Ht..pap.hhppl.t... CONSENSUS/65% pIclsshlhppp..chlhpslhHElsHhhlahh..s+sh..sHs.tsa+hhhppltth.. CONSENSUS/50% pIcLNPplLpppsp-cltpllhHELCHhtlalh..sRst..sHG.c-a+tlhccVsul.s Q9NTV0/43-214 A--NITVYHTFHDEVDEY--RRHWWRCN-GPCQHRPPYYGYVKRATNREPSAHDYWWAEH CONSENSUS/80% ......hht.h..p.......pa.a.Ct...Ctpt.....p.p+..p..........hhC CONSENSUS/65% ......phpsht.csh....tpahYpCp...Cppp.....ph++tss........thhhC CONSENSUS/50% p.....RhHsapscsht...ppahYpCp...Csp+hh...phRRsssh.......tcYcC Q9NTV0/43-214 QKTCGGTYIKI CONSENSUS/80% .tpCttphhhh CONSENSUS/65% .tpCpGplhhh CONSENSUS/50% .tcCpGcLlhh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |