246195.DNO_0772_from_367_to_45SFGKDVYKIGMTRRLEPLDRVRELG--DASVPF-SFDVHAMIYSA--------------- CONSENSUS/80% ...t.hhKlGhopt....pRhtph....sth....h.h...................... CONSENSUS/65% sttpslhKIGhTpp.psppRlppht..tsss.h..hpshhhh.st............... CONSENSUS/50% stscslhKIGhTsc.ssccRlccLs..psussh.hhclthhhpsp............... 246195.DNO_0772_from_367_to_45-------------DAPALESSLHERFADYA-------------------VNKVNKRKEFF CONSENSUS/80% ................thEt.lHp.ht............................ttEaF CONSENSUS/65% .............th.phEphlHpthpt......................tpht.ppEaF CONSENSUS/50% .............sssclEstlHcpFss......................schssc+EaF 246195.DNO_0772_from_367_to_45R-LPLNEIKRYLEEE CONSENSUS/80% t.hs.tth.thht.h CONSENSUS/65% p.lshpplpphlpph CONSENSUS/50% c.lslcclccslpcl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |