pr5_arath FTLRNNCPTTVWAGTLAG-QGPKLGDGGFELTPGASRQLTAPAGWS-GRFWARTGCNFDA CONSENSUS/80% hphhNpCsasVWsuh.ss.......sGGhpLttttuhph.sssshp.uRhWuRTsCpaDt CONSENSUS/65% hplhNpCsaTVWsus.ss.......sGGhpLssspSaplssPsuhp.uRhWuRTsCsFDs CONSENSUS/50% FollNNCPYTVWAAusPu.tpshLsGGGFcLsuGpSWpLsAPsGTshGRIWARTGCNFDu pr5_arath SGNGRCVTGDCGG--LRCNG-GGVPPVTLAEFTLVG-DGGKDFYDVSLVDGYNVKLGIRP CONSENSUS/80% uG+hhCtTGDCuG..lpCpG.G..sPsTLAEasL.t..sshDaaDlSllDGaNlshsh.P CONSENSUS/65% SG+GhCtTGDCGG..lpCsGhG.tPPsTLAEasLst.hsshDFaDlSllDGFNlPhshtP CONSENSUS/50% SGRGpCsTGDCGG.sLpCsGaGucPPsTLAEFuLsQ.ausLDFYDISLVDGFNlPMSFoP pr5_arath SG--GSGDCKYAGCVSDLNAACPDMLKVMDQN---NVVACKSACERFNTDQYCCRGANDK CONSENSUS/80% pt..Gstt...htCsuslst.CPs.Lph.ut........CpssC.hFtsspYCCps...s CONSENSUS/65% st..Gsup..hstCsuslNutCPs.Lph.ut........CpsACssFpospYCCss...s CONSENSUS/50% ou..GsGcCpsluCsADlNupCPusL+scGus....VVuCNSACosFsTsQYCCTsstsu pr5_arath PETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG--ANYEITFCP CONSENSUS/80% s..C.PTtYSchFKttCPcAaSYs.Dc.pshhTCss..ssYtlhFCP CONSENSUS/65% s..CtPTsYS+hFKptCPDAYSYshD-sooTaTCsu..sNYcVsFCP CONSENSUS/50% PpoCsPTsYSRaFKsACPDAYSYAaDDPTSTFTCous.oNY+VTFCP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |