G2707219/1-133 PGQDGAQAGVDGT-------VSGWEEARINSSS--PLRYNRQIGE--FIVTRAGLYYLYC CONSENSUS/80% .htclhst...............W.ts.t.t.....tshphppsp..lhl.psGhYhla. CONSENSUS/65% .hs+lhspt.t..........htW.sshths.....pshphpssp..LllppsGhYhla. CONSENSUS/50% ssAHLlusssspp.......sLsWpsstutuhh...sGhclpcup..LVlspsGLYalYs G2707219/1-133 QVHFDE----------GKAVYLKLDLLVDGVLA------LRCLEE-FSATAASSL----- CONSENSUS/80% ph.ht................hthpl.h.t.t.......h.hh.t...s........... CONSENSUS/65% plhap................lphplhhptsph.....tl.lhts.hpsss.s....... CONSENSUS/50% QlpFpsptss........slplslsLphpsspt...PtslsLlss.tposstsht..... G2707219/1-133 ---GPQLRLCQ-VSGLLALRPGSSLRIRT------LPWAHLKAA----PFLTYFGLFQV CONSENSUS/80% .....hht.sh..shhh.Lptsppl.lph......st..hlphs.......shauhh.h CONSENSUS/65% .....ahppsh..uslhtLptucpl.lps......sp.thlphs.....ttshFGhhhl CONSENSUS/50% ...thahcpsa.lGulhpLpsG-cLsVsl......ss.shlchs....sspoaFGlatl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |