GYBR_STRSH/1-6 GLHHLVQELVDNSVDEALAGV------ADRIDVTVLADG-GVRVVDNGRGIPVGMHPVEK CONSENSUS/80% GLa+lh.EllsNuhDphhts.......hspIplhlp.pt..lpV.ssG+GlPlthH.p.. CONSENSUS/65% GLa+lh.EIlsNuhDEthsuh......sspIcVplct-s.tloVhDsGRGIPlshHtptt CONSENSUS/50% GLHHLlaEIlDNAlDEAluGa......sspIcVsIcs-s.sIoVpDNGRGIPV-hHpcpp GYBR_STRSH/1-6 ------RPAVEVVLTVLHAGGKFGGGGYGVSGGLHGVGLSVVNALSTRLSAEIWTD--GH CONSENSUS/80% . h.s.-hlhs.LhsuupasssthpsoGGhpGhGsplsNhhSpphtlpshpp..tp CONSENSUS/65% . h.ssEhlhshLpuGuKFssssa+soGGLpGVGuplsNALSpchpVpstcs..t+ CONSENSUS/50% . hsslElIFTpLHAGGKFDssuYKlSGGLHGVGASVVNALSochcVcVp+c..GK GYBR_STRSH/1-6 RWTQDYRD-GAPTAPLARHEATS---RTGTSLTFWADGDIFETT-----EYSFETLARRH CONSENSUS/80% .ahttapp.h..ht..thht.st...cphTplpFhsD.phFt.t.....p...thhtpRh CONSENSUS/65% happpapp.tt.hsthchhsssp...csGTplpFhPD.phFpts.....phphphlpcRl CONSENSUS/50% pacQsaccsGssssclcltusoc...+cGTcVsFpPDssIFcpst....cashcllp+Rl GYBR_STRSH/1-6 QEMAFLN-GGLTLTLTDERSSARATAAVDEADSDPTAKTVS----------------YRY CONSENSUS/80% hchAhh..pslpl.hpsp........................................h. CONSENSUS/65% h-hAhL..pslplplsspc......................................hhh CONSENSUS/50% p-lAaLs.+GlcIpLsDcRtsttt.................................ata GYBR_STRSH/1-6 DGGITDFVVHLNARKGEPAH---------------------------------------- CONSENSUS/80% .tuhhpalp.h.pstp............................................ CONSENSUS/65% .sGlpcalphhspspp.ht......................................... CONSENSUS/50% psGlc-YVchlscsKcslsp........................................ GYBR_STRSH/1-6 --PSVITIAAEDT-------ERLLSAEIALQWNGQY----TDSVYSYANAIHTHEGGTHE CONSENSUS/80% ....hh...t...............h-hshthspt.......p.hSFsNsltT.cGGTH. CONSENSUS/65% ...shhh.tpps...........hphElAhphscsh....ttphhSFsNsItThcGGTH. CONSENSUS/50% ..pshhstpccss..........hclElAlpao-uh....spsllSFVNsIsTp-GGTHp GYBR_STRSH/1-6 EGFRTALTTVVNRYAREKRLLRDK---DANLSGEDIREGLTAIISVNVGEP--QFEGQTK CONSENSUS/80% phhtptlhphhpphhpp.th..........lp.tpl+pthhshlshhh.pP..tFpuQTK CONSENSUS/65% suhpsulscslschsccpphhp......tplpsp-l+pslsshlslhlspP..pF-uQTK CONSENSUS/50% sGF+sAls+slN-Yu+Kpphh+pt....sslcucDlREGLsAlISl+Is-P..pFEGQTK GYBR_STRSH/1-6 TKLGNTEVRTLLQKIVHEHLADWFDRNPNEAVDIVRKAVQAATARVA-----ARKARDLT CONSENSUS/80% ppLssptsp.h.....tcth...h..p...tptllpphh..tph+.t......pphpp.t CONSENSUS/65% p+Lssppsphhstt.hscph.phh.pss..sptllcchlttsct+ht......+ph+chs CONSENSUS/50% cKLuosEs+tsVppllu-phtpaltcNsspAssIl-KllpsAcARts.....t+cs+-ss GYBR_STRSH/1-6 RR--KGLLETAALPGKLSDCQSNDPA----TSEIFIVEGDSAGGSAKAGRN---PQYQAI CONSENSUS/80% t.....hhp.h.h.sKLsDspptsst.....splhlsEGDSAtu.AhtGhs...pph.ul CONSENSUS/65% +p...tthpphph.sKLsDssppssp....tspLalsEGDSAsGoAhtGRs...RphQAl CONSENSUS/50% R+..psspcptsLsGKLsDAsosssc....psELalVEGDSAGGSAKuGRs...RcaQAI GYBR_STRSH/1-6 LPIRGKILNVEKARIDKVLQ-NQENQALISAFGTGVHED----FDIAKLRYHKIILMADA CONSENSUS/80% hPLRGKllNVpcsphpplhp.NpEltslhthlGhthtpp.....shpph+Yt+lhlMsDt CONSENSUS/65% hPLRGKlLNVccuphcclhp.NpEIpslhpslGhshtpp....hslcpLRYt+llIMTDA CONSENSUS/50% LPLRGKlLNVcKAshccIlc.NcEIpslIpuLGsGlucc....FclccLRYsKIIIMTDA GYBR_STRSH/1-6 DVDGQHISTLLLTFLFRFMRPLVEEG--HVHLSRPPLYKIKWSRE---HVEYAYSDRERN CONSENSUS/80% DhDGuHIpsLllsFhaphh..Llp.s..alh.h.sPlh+hp.tp........h..ht..p CONSENSUS/65% DsDGuHIpsLLlTFha+ah.sLlctG..alalhhsPLaKlphtpt......hhthhphp- CONSENSUS/50% DsDGuHI+sLLLTFFaRaMpsLlEpG..alalAlPPLYKlopscp.....tthsahphcE GYBR_STRSH/1-6 TLLERGRRDGRRIR-DDSIQRFKGLGEMNAEELRVTTMDPDHRVLGQVTLDDAAFAD--D CONSENSUS/80% ..t.h.t........thplphYKGLGp.sspphh-hh.s.pp+hhh.h.htst.tt...t CONSENSUS/65% hhp.htpp.......phplpRYKGLGEhsspphhEshhs.cp+plhhVtlp-ttps...p CONSENSUS/50% hccphpppt....ptsasIQRYKGLGEMsucQLaETTMDP-+RplhpVslcDsscu-..c GYBR_STRSH/1-6 LFSVLMGEDVEARRHFIQRNAQ CONSENSUS/80% h..hh.tccsp.R+palpp.h. CONSENSUS/65% lhpshMuccs-.R+paIppss. CONSENSUS/50% lhssLMG-+VEsRKcWIpcNss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |