GYRA_CAMJE/1-4 VDIENSIKSSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMQNDEAKSRTDFVKSARIV CONSENSUS/80% hshtp.hppphl.auh.s..tRulPshhDGhKPspR+lLash.pht.p..t.hhtphthh CONSENSUS/65% lslp-.hpppalpYuh.ll.sRAlPslhDGLKPVpRRlLYuhhchshp.tcshhKsupss CONSENSUS/50% lslcDhlccualcYAM.VIsuRALPDlRDGLKPVQRRILYuMactulssscsa+KsARlV GYRA_CAMJE/1-4 GAVIGRYHPHGDTAVYDALVRMAQDFS--MRYPSITGQGNFGSI--DGDSAAAMRYTEAK CONSENSUS/80% st.hutYH.t.-tulhpshlphAQsas...ph.llpspGpFGoh..sGcssAAhRYh.sc CONSENSUS/65% GsshupYHPHGDsula-slV+MAQsFs...phsLlcspGNFGSh..sGcssAAhRYhEs+ CONSENSUS/50% G-lhGcYHPHGDuSlY-olVRMAQsFo..hRhsLl-GpGNFGSh..DGDsAAAMRYTEsR GYRA_CAMJE/1-4 MSKLSH-ELLKDIDKDTVDFVPNYDGSESEPDVLPSRVPNLLLNGSSGIAVGMATNIPPH CONSENSUS/80% hs.hs...hhtthsc.hlpa..p.Dsp..EP.hhsshhP.lLhNGupGIusGhuTpIPsa CONSENSUS/65% hs.lup..lhp-lDcshlcahssaDspphEPphhsshhP.lLlNGusGIusGhATsIPPH CONSENSUS/50% LoclAc.pLlcDlDccTVDFlsNaDGscpEPsVLPuplPsLLlNGooGIAVGMATNIPPH GYRA_CAMJE/1-4 SLNELIDGLLYLLDNKDAS----LEEIMQFIKGPDFPTGGIIYGKKG-IIEAYRTGRGRV CONSENSUS/80% s.t-lhsshhhhlps.php..........h..h.sF.ssh.h.s.tt............h CONSENSUS/65% NhtEllsulhthlss.phs.......hh.h..uPDFPssu.lhuppt.......tG.G.h CONSENSUS/50% NLsEll-ulhtllcsscss....ltplhphlhGPDFPTuupIhGpsu.ltpsYpTG+Gpl GYRA_CAMJE/1-4 KVRAKTHIEKKTNK-------DVIVIDELPYQTNKARLIEQIAELVKER----------- CONSENSUS/80% hhpuphph.p............tl.lsElPhth.ptphhppltphhttt........... CONSENSUS/65% hhpuchchtpt..........ttlhloElPapsspsphhcpIs-hhppp........... CONSENSUS/50% tlRu+hclEcstt........ppIlITELPaplsKucllE+Iu-Llc-c........... GYRA_CAMJE/1-4 -------QIEGISEVRDES-NKEGIRVVIELKRE---AMSEIVLNNLFKSTTMESTFGVI CONSENSUS/80% ........h..l.p.hc-p.scptl+hhlphppt......phhhttLhp.htLp.shshp CONSENSUS/65% .......plpsl.plhDEo.scsslRllIclccs...t.scslhspLachhpLpsshshs CONSENSUS/50% .......KlcuIscl+DES.c+sGlRlVIELK+c...ssu-sllspLaKpTpLQooaulN GYRA_CAMJE/1-4 MLAIH--NKEPKIFSLLE--LLNLFLTHRKTVIIRRTIFELQKAR--ARAHILEGLKIAL CONSENSUS/80% .hsl...pt..h.hsh.t..hlp.ahthphphhhpRtta.ltphp...phh..pshhhhh CONSENSUS/65% .hslh..sspPphhslhp..lLptahphRhchlt+RppapLpchp..t+hchhpuhhlsh CONSENSUS/50% hlsLs..cGpP+hhslcc..ILccFlc+Rc-llpRRscacLcKsc..pRtHIlcGLhIAl GYRA_CAMJE/1-4 DNIDEVIALIKNSSDNN-TARDSLVAK--------------------------------- CONSENSUS/80% ...scll..h+tpts....hht.hht.................................. CONSENSUS/65% .thccllhhh+pppsh..phcpthhtp................................. CONSENSUS/50% sslDElItlIRsucsss.cA+ppLhs+................................. GYRA_CAMJE/1-4 ---------------------FGLSELQANAILDMKLGRLTGLE-REKIENELAELMKEI CONSENSUS/80% ...........................phphllthtl.pLot.c.htcl.tphpph.tpl CONSENSUS/65% .....................hthst.psptlLphpLtpLTth-.hpcl.pEhpcl.pcl CONSENSUS/50% .....................aplocpQAcAILcMcLp+LTsh-.pc+LpcEtcELppcI GYRA_CAMJE/1-4 ARLEEILKSETLLE CONSENSUS/80% tth.phhsp..hh. CONSENSUS/65% pplppllssp.hhp CONSENSUS/50% ssLcclLuscpclp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |