269798.CHU_3453_from_973_to_1074ETDLSILIPDTYV------TNISERLSLYSTIDN-IKN----ETELTSFIQGLTDRFGPL CONSENSUS/80% pl.hsshlPppYl.......s.p.+lthY++lst.hps.....ttlttlt.EhhDRFG.h CONSENSUS/65% sLtlsAhlPcsYl......sD.p.RlphY++lus.sps....ppclpplptELhDRFG.l CONSENSUS/50% -LslsAhIP--YI......sDscpRLplYKRlAs.sco....cc-lc-lpsELlDRFGpL 269798.CHU_3453_from_973_to_1074PKEVIDLTETIKLRWLAQELGFEKLTI---KNDV---MRCQ--FVPS--ERTSYYT---- CONSENSUS/80% P..sttLhthh.l+hhspthtltplp....t.pt...h.l...h........p....... CONSENSUS/65% PptsppLlplspl+hhupphulpclct...ttpt...hhlp..attp..s.hs..t.... CONSENSUS/50% PcsVcsLLclscLKlhAcclGlp+Ics...ssps...lplp..Fsss..ssh-stp.... 269798.CHU_3453_from_973_to_1074SDVFGSI CONSENSUS/80% .hh.hht CONSENSUS/65% .hhhhhp CONSENSUS/50% .llthhp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |